Difference between revisions of "Ultrasound SWS Biomarker Ctte"

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==Project Snapshot==
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{{TOCright}}
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:Co-chairs: David Fetzer, MD; Stephen McAleavey, PhD; Stephen Rosenzweig, PhD
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:RSNA Staff Support: Julie Lisiecki
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* [http://tinyurl.com/QIBA-US-SWS-Roster Roster]
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==Project Snapshot - Shear Wave Speed (SWS)==
 
An Ultrasound Quantitative Biomarker Planning Meeting was held on Thursday, March 29, 2012 at the 2012 American Institute of Ultrasound in Medicine (AIUM) Annual Convention, in Phoenix, AZ.   
 
An Ultrasound Quantitative Biomarker Planning Meeting was held on Thursday, March 29, 2012 at the 2012 American Institute of Ultrasound in Medicine (AIUM) Annual Convention, in Phoenix, AZ.   
The purpose of this meeting was to plan an effort by the biomedical ultrasound community to create and support implementation of a QIBA Profile for a quantitative biomarker in ultrasound imaging. Shear Wave Speed was selected as the qualifying biomarker at this meeting and planning efforts continue.
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T
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he purpose of this meeting was to plan an effort by the biomedical ultrasound community to create and support implementation of a QIBA Profile for a quantitative biomarker in ultrasound imaging. Shear Wave Speed was selected as the qualifying biomarker at this meeting.
  
==Ultrasound Subcommittees==
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Public Comment for Version 1.0 of the Profile, QIBA US Measurement of Shear Wave Speed for Estimation of Liver Fibrosis, closed December 18, 2019.
:* [[Combined: System Dependencies & Phantom Development Subcommittees]] 
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:* [[Clinical Applications and Biological Targets Subcommittee]]
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:* [[Phantom Development Subcommittee]]
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:* [[System Dependencies Subcommittee]] 
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:* [[SWS Reporting and Results Transmission Subcommittee (no charge yet provided)]]
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==Meetings/Call Summaries==
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==Profile Development==
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Status - Consensus voting in progress - updates to Profile have been made since public comment
  
==2014 call summaries==
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See Profiles page for copy of the Profile:  http://qibawiki.rsna.org/index.php/Profiles
  
* No call for June due to UITC Symposium
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'''Profile versions''':
  
*[[Media:05 09 2014 QIBA US SWS TC Call Summary-DRAFT.pdf|05.09.2014 QIBA US SWS Tech Ctte Call Summary]]
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*[[Media:QIBA_US_SWS_Profile_03.19.2021-clean version.pdf|US Shear Wave Speed for Liver Fibrosis 2021-03-19]] (clean version - Consensus vote)
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*[[Media:QIBA_US_SWS_Profile_03.19.2021-with edits.pdf|US Shear Wave Speed for Liver Fibrosis 2021-03-19]] (version with edits for Consensus vote)
  
*[[Media:04 11 2014 QIBA US SWS TC Call Summary-DRAFT.pdf|04.11.2014 QIBA US SWS Tech Ctte Call Summary]]
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:*[[Media:SWS Checklists-Appendix E-03.19.2021.xlsx|Appendix E: SWS Checklists]] (updated March 19, 2021)
  
*[[Media:03 14 2014 QIBA US SWS TC Call Summary-DRAFT.pdf|03.14.2014 QIBA US SWS Tech Ctte Call Summary]]
 
  
*[[Media:02 10 2014 QIBA US SWS TC Call Summary-FINAL-BG-PC2.pdf|02.10.2014 QIBA US SWS Tech Ctte Call Summary]]
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'''January 2021 revisions''':
 +
*[[Media:QIBA_US_SWS_Profile_01.29.2021.pdf|US Shear Wave Speed for Liver Fibrosis 2021-01-29 - revisions complete]]
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*[[Media:QIBA_US_SWS_Profile_01.29.2021-IP.pdf|US Shear Wave Speed for Liver Fibrosis 2021-01-29 - revisions in progress]]  
  
*[[Media:01 10 2014 QIBA US SWS TC Call Summary FINAL.pdf|01.10.2014 QIBA US SWS Tech Ctte Call Summary]]
 
  
==Call Summary Archive==
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'''Public Comment:'''
*[[QIBA Ultrasound SWS Call Summary Archive]]
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*[[Media:QIBA_US_SWS_Profile_10.21.19.pdf|US Shear Wave Speed for Liver Fibrosis 2019-10-21]] ('''closed''' on December 18, 2019)
  
====call schedule====
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:*[[Media:SWS Checklists-Appendix E.xlsx|Appendix E: SWS Checklists, 2019-10-21]] ('''closed''' on December 18, 2019)
*[[Media:US SWS call schedule model.png|QIBA US SWS call schedule model.png]]
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==Ultrasound Conferences==
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'''''[[Working Documents Archive]]'''''
*[[Media:2014 Ultrasound Conferences-3.doc|List of 2014 Ultrasound Conferences known with links]]
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==Groundwork Projects==
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==SWS Task Forces==
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:* [[Combined: System Dependencies & Phantom Development Subcommittees]] 
 +
:* [[Clinical Applications and Biological Targets Subcommittee]]
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:* [[Phantom Development Subcommittee]]
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:* [[System Dependencies Subcommittee]] 
 +
:* [[SWS Reporting and Results Transmission Subcommittee (no charge yet provided)]]
  
==Profile Development==
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==Recent US-SWS Meetings==
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'''Approved call summaries:'''
  
==Tools==
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*[[Media:10 20 2021 QIBA US SWS BC Call Summary-FINAL.pdf | October 20, 2021]]
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*[[Media:08 18 2021 QIBA US SWS BC Call Summary-FINAL-DF.pdf | August 18, 2021]]
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*[[Media:07 21 2021 QIBA US SWS BC Call Summary-FINAL.pdf | July 21, 2021]]
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*[[Media:05 19 2021 QIBA US SWS BC Call Summary-FINAL-2.pdf | May 19, 2021]]
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*[[Media:03 19 2021 QIBA US SWS BC Call Summary-FINAL-2.pdf | March 19, 2021]]
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*[[Media:01 22 2021 QIBA US SWS BC Call Summary-FINAL.pdf | January 22, 2021]]
  
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*[[Media:11 20 2020 QIBA US SWS BC Call Summary-FINAL.pdf | November 20, 2020]]
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*[[Media:09 11 2020 QIBA US SWS BC Call Summary-FINAL.pdf | September 11, 2020]]
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*[[Media:06 05 2020 QIBA US SWS BC Call Summary-FINAL.pdf | June 5, 2020]]
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*[[Media:02 07 2020 QIBA US SWS BC Call Summary-FINAL.pdf | February 7, 2020]]
  
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'''''[[US SWS Call Summaries Archive]]'''''
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==Conferences==
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*[[Media:List of 2020 Imaging-Related conferences(updated 02-14-2020).pdf|2020 Imaging-Related Conferences with links]]
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==<font color=green>'''Tools'''</font>==
  
 
*QIBA Mendeley Group -> Literature Database - [http://www.mendeley.com/groups/2396601/qiba-sws/ | QIBA Mendeley Group]
 
*QIBA Mendeley Group -> Literature Database - [http://www.mendeley.com/groups/2396601/qiba-sws/ | QIBA Mendeley Group]
  
''Literature for this the QIBA SWS Technical Committee has been compiled using Mendeley, and is called 'QIBA SWS'. This is a  
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''Literature for this the QIBA SWS Biomarker Committee has been compiled using Mendeley, and is called 'QIBA SWS'. ''This is a  
public group that anyone can join. If you would like a specific invitation to join, please email Dr. Palmeri.''
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public group that anyone can join. If you would like a specific invitation to join, please email Dr. Palmeri.''  
  
*QIBA Elastic CIRS Phantom Simulation Data -> Public Web Server - [http://dukemil.egr.duke.edu/qiba/cirs_elastic_fem/ | http://dukemil.egr.duke.edu/qiba/cirs_elastic_fem/]
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*QIBA Elastic CIRS Phantom Simulation Data -> - [ https://github.com/RSNA-QIBA-US-SWS/QIBA-DigitalPhantoms ] or https://zenodo.org/record/3497594
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- <font color=green>New data has been uploaded to the QIDW</font> {  https://qidw.rsna.org/ }
  
*QIBA Finite Element Tool Repository Online & Elastic / VE Simulation Data - [https://github.com/RSNA-QIBA-US-SWS/fem.git | https://github.com/RSNA-QIBA-US-SWS/fem.git ]
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*QIBA Finite Element Tool Repository Online & Elastic / VE Simulation Data - [ https://github.com/orgs/RSNA-QIBA-US-SWS/dashboard ]
  
 
*Web browsers recommended:  ''Firefox'' ''or'' ''Google Chrome''
 
*Web browsers recommended:  ''Firefox'' ''or'' ''Google Chrome''
  
==Working Documents==
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==US Phantoms==
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*Exploratory QIBA Elastic and Viscoelastic homogeneous SWS calibration liver phantoms, CIRS model 039 and prototype. 
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*Exploratory Volume Flow Doppler Phantom with nonparabolic flow - Sun Nuclear prototype. 
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*Research flow phantom for contrast ultrasound testing, M. Averkiou, Univ. of Wash.
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Phantom Simulation Data -> http://www.rsna.org/qidw/
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https://github.com/RSNA-QIBA-US-SWS/QIBA-DigitalPhantoms
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QIBA Finite Element Tool Repository Online & Elastic / Viscoelastic Simulation Data - [https://github.com/orgs/RSNA-QIBA-US-SWS/dashboard]
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==Digital Phantoms==
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''See ultrasound digital phantoms'':
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*Permanent source code for digital phantoms: https://github.com/RSNA-QIBA-US-SWS/QIBA-DigitalPhantoms(https://zenodo.org/badge/latestdoi/31222567)
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*Permanent digital phantom data: https://doi.org/10.7924/r4sj1f98c (this is associated with the code above)
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==Software==
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''See reference imaging system software:''
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*Verasonics scanner sequences and processing code: https://github.com/RSNA-QIBA-US-SWS/VerasonicsPhantomSequences
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*Test Verasonics data for post-processing output: https://doi.org/10.7924/r4df6q75s
  
 
==Reference Materials==
 
==Reference Materials==
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'''Article citations:'''
 
'''Article citations:'''
 
* Sebastiani G, Alberti A.  How far is noninvasive assessment of liver fibrosis from replacing liver biopsy in Hepatitis C?  ''Journal of Viral Hepatitis,''2012, 19 (Suppl. 1), 18–32.  [http://www.http://www.ncbi.nlm.nih.gov/pubmed?term=Sebastiani%20G%2C%20Alberti%20A.%20%20How%20far%20is%20noninvasive%20assessment%20of%20liver%20fibrosis%20from%20%20replacing%20liver%20biopsy%20in%20Hepatitis%20C%3F%20%20Journal%20of%20Viral%20Hepatitis%2C%202012%2C%2019%20(Suppl.%201)%2C%2018%E2%80%9332. PubMed citation]
 
* Sebastiani G, Alberti A.  How far is noninvasive assessment of liver fibrosis from replacing liver biopsy in Hepatitis C?  ''Journal of Viral Hepatitis,''2012, 19 (Suppl. 1), 18–32.  [http://www.http://www.ncbi.nlm.nih.gov/pubmed?term=Sebastiani%20G%2C%20Alberti%20A.%20%20How%20far%20is%20noninvasive%20assessment%20of%20liver%20fibrosis%20from%20%20replacing%20liver%20biopsy%20in%20Hepatitis%20C%3F%20%20Journal%20of%20Viral%20Hepatitis%2C%202012%2C%2019%20(Suppl.%201)%2C%2018%E2%80%9332. PubMed citation]
 
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'''Funded-Project Reports:'''
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*[[Media:FINAL REPORT-DrSamir-QIBA Round 3 Project (2013-2014) Report.pdf|FINAL REPORT-Dr. Samir - QIBA Round 3 Project (2013-2014)- posted on 3/31/2015 for Dr. Samir (Massachusetts General Hospital / Harvard )]]
  
 
'''Presentations and Reports:'''
 
'''Presentations and Reports:'''
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*[[Media:ITEC 2016 Clinical Workflow (10.21.2016).pdf | 2016 ITEC: RSNA-QIBA SWS Profile – What the Clinical Workflow Would look like and a Review of Biological Confounders]] ''Manish Dhyani, MD''
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*[[Media:ITEC 2016 Profile (10.21.2016).pdf | 2016 ITEC: The RSNA-QIBA SWS Profile: Current Status,Methods in Generating the Profile and a Discussion of Currently Open and Closed Issues]] ''Manish Dhyani, MD''
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*[[Media:ITEC 2016 FDA (10.21.2016).pdf | 2016 ITEC: QIBA SWS Profile Effects: Clinical, Research, Regulatory]] ''Brian Garra, MD''
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*[[Media:ITEC 2016 phantoms(10.21.2016).pdf | 2016 ITEC: RSNA-QIBA Comparison of Shear Wave Speed Estimation in Viscoelastic Phantoms]] ''Tim Hall, PhD''
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*[[Media:ITEC 2016 QIBA US Overview(10.21.2016).pdf | 2016 ITEC: Overview of QIBA Ultrasound Activity]] ''Tim Hall, PhD''
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*[[Media:Poster_IEEE2015_QIBA_(11.06.2015).pdf|2015 IEEE International Ultrasonics Symposium Poster: RSNA /QIBA Ultrasound Shear Wave Speed Phase II Phantom Study in Viscoelastic Media]]
 
*[[Media:CIRS E2250 Phantom Measurements.pdf|CIRS E2250 Phantom Measurements- presented on 7/11/2014 by Dr. Mark Palmeri (Duke University)]]
 
*[[Media:CIRS E2250 Phantom Measurements.pdf|CIRS E2250 Phantom Measurements- presented on 7/11/2014 by Dr. Mark Palmeri (Duke University)]]
 
*[[Media:Comparison of Viscoelastic Properties of CIRS Phantoms and Human Liver Ned.pdf|Comparison of Viscoelastic Properties of CIRS Phantoms and the Human Liver - presented on 3/21/2014 by Dr. Ned Rouze (Duke University)]]
 
*[[Media:Comparison of Viscoelastic Properties of CIRS Phantoms and Human Liver Ned.pdf|Comparison of Viscoelastic Properties of CIRS Phantoms and the Human Liver - presented on 3/21/2014 by Dr. Ned Rouze (Duke University)]]
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*[[Media: QIBA Ultrasound Biomarkers Meeting, 03.29.2012-Dr. Rognin.pdf|QIBA Ultrasound Biomarkers Meeting, 03.29.2012-Dr. Rognin Presentation]]
 
*[[Media: QIBA Ultrasound Biomarkers Meeting, 03.29.2012-Dr. Rognin.pdf|QIBA Ultrasound Biomarkers Meeting, 03.29.2012-Dr. Rognin Presentation]]
 
*[[Media: QIBA Ultrasound Biomarkers Meeting, 03.29.2012-Dr. Rubin.pdf|QIBA Ultrasound Biomarkers Meeting, 03.29.2012-Dr. Rubin Presentation]]
 
*[[Media: QIBA Ultrasound Biomarkers Meeting, 03.29.2012-Dr. Rubin.pdf|QIBA Ultrasound Biomarkers Meeting, 03.29.2012-Dr. Rubin Presentation]]
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==QIBA Funded Projects==
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====Round 3====
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*[[Media:Phase 2 Phantom Study with Inelastic, SWS-Dispersive Media.pdf | Project (D) Phase 2 Phantom Study with Inelastic, SWS-Dispersive Media (University of Wisconsin - Madison)]]
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*[[Media:A Pilot Study of the Effect of Steatosis and Inflammation on Shear Wave Speed for the Estimation of Liver Fibrosis Stage in Patients with Diffuse Liver Disease.pdf | Project (I) A Pilot Study of the Effect of Steatosis and Inflammation on Shear Wave Speed for the Estimation of Liver Fibrosis Stage in Patients with Diffuse Liver Disease (Massachusetts General Hospital)]]
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*[[Media:Numerical Simulation of Shear Wave Speed Measurements in the Liver.pdf | Project (K) Numerical Simulation of Shear Wave Speed Measurements in the Liver (Duke University)]]
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====Round 4====
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*[[Media:Beyond Confounders-Addressing Sources of Measurement Variability and Error in Shear Wave Elastography.pdf | Project (W) Beyond Confounders-Addressing Sources of Measurement Variability and Error in Shear Wave Elastography (Massachusetts General Hospital)]]
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*[[Media:Development and Validation of Simulations and Phantoms Mimicking the Viscoelastic Properties of Human Liver.pdf | Project (Z) Development and Validation of Simulations and Phantoms Mimicking the Viscoelastic Properties of Human Liver (Duke University)]]
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====Round 5====
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*[[Media:Analysis of Sources of US SWS Measurement Inter-System Variability.pdf | Project (F) Analysis of Sources of US SWS Measurement Inter-System Variability (Duke University)]]

Latest revision as of 20:58, 20 October 2021

Co-chairs: David Fetzer, MD; Stephen McAleavey, PhD; Stephen Rosenzweig, PhD
RSNA Staff Support: Julie Lisiecki

Project Snapshot - Shear Wave Speed (SWS)

An Ultrasound Quantitative Biomarker Planning Meeting was held on Thursday, March 29, 2012 at the 2012 American Institute of Ultrasound in Medicine (AIUM) Annual Convention, in Phoenix, AZ. T he purpose of this meeting was to plan an effort by the biomedical ultrasound community to create and support implementation of a QIBA Profile for a quantitative biomarker in ultrasound imaging. Shear Wave Speed was selected as the qualifying biomarker at this meeting.

Public Comment for Version 1.0 of the Profile, QIBA US Measurement of Shear Wave Speed for Estimation of Liver Fibrosis, closed December 18, 2019.

Profile Development

Status - Consensus voting in progress - updates to Profile have been made since public comment

See Profiles page for copy of the Profile: http://qibawiki.rsna.org/index.php/Profiles

Profile versions:


January 2021 revisions:


Public Comment:

Working Documents Archive

SWS Task Forces

Recent US-SWS Meetings

Approved call summaries:


US SWS Call Summaries Archive

Conferences

Tools

Literature for this the QIBA SWS Biomarker Committee has been compiled using Mendeley, and is called 'QIBA SWS'. This is a public group that anyone can join. If you would like a specific invitation to join, please email Dr. Palmeri.

- New data has been uploaded to the QIDW { https://qidw.rsna.org/ }

  • Web browsers recommended: Firefox or Google Chrome

US Phantoms

  • Exploratory QIBA Elastic and Viscoelastic homogeneous SWS calibration liver phantoms, CIRS model 039 and prototype.
  • Exploratory Volume Flow Doppler Phantom with nonparabolic flow - Sun Nuclear prototype.
  • Research flow phantom for contrast ultrasound testing, M. Averkiou, Univ. of Wash.

Phantom Simulation Data -> http://www.rsna.org/qidw/ https://github.com/RSNA-QIBA-US-SWS/QIBA-DigitalPhantoms

QIBA Finite Element Tool Repository Online & Elastic / Viscoelastic Simulation Data - [1]

Digital Phantoms

See ultrasound digital phantoms:

Software

See reference imaging system software:

Reference Materials

Article citations:

  • Sebastiani G, Alberti A. How far is noninvasive assessment of liver fibrosis from replacing liver biopsy in Hepatitis C? Journal of Viral Hepatitis,2012, 19 (Suppl. 1), 18–32. PubMed citation

Funded-Project Reports:

Presentations and Reports:

QIBA Funded Projects

Round 3

Round 4

Round 5