Category:Datasets

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<We might eventually create individual pages for each dataset with an index table linking to them from here, but for now we don't have a normalized format so put them all here.>

This is a catalog of imaging datasets of interest to QIBA.

Please feel free to correct, edit and provide supplemental information.

Lung Nodules

National Biomedical Imaging Archive Databases

NBIA Log-in Page

  • From the above NBIA link, it is possible to log-in or register as a NBIA user
  • Once logged in, click on Search Images
  • Filter as follows for the 32 MSK Coffee Break Datasets:
    • Collection(s):RIDER
    • Available on NBIA
    • From (mm/dd/yyyy): 07/17/2009 to 07/17/2009
    • Submit
    • Follow prompts to 32 MSK Coffee Break CT Image Sets

RIDER CT Clinical

  • Intended Purpose of Dataset: evaluate ability to measure tumor change
  • Modality: CT
  • Slice Thickness: mostly 5mm (few with thin slice <1.5mm)
  • Acquisition Details:
  • # of Patients: 300 (as of Sept 2008)
  • Patient Demographics/Selection Details:
  • Typical # of timepoints: most with multiple, includes "coffee break"/"no change"
  • Outcome Data: None
  • Details of Reading/Markup performed: No Contours, limited set annotated by two readers with RECIST markings
  • Contact Person:
  • Public Availability: on NCIA
  • Description:

LIRC

  • Intended Purpose of Dataset: Comparing computer vs reader volumetric measurements
  • Modality: CT
  • Slice Thickness: 50% "thick"/50% "thin"
  • Acquisition Details:
  • # of Patients: 84 (as of Oct 2008)
  • Patient Demographics/Selection Details:
  • Typical # of timepoints: Single
  • Outcome Data: None
  • Details of Reading/Markup performed: Contours available for all 3mm diameter nodules; Four radiologists marked up each case; possible issues with over/under segmentation
  • Contact Person:
  • Public Availability: at NCI


<Other Pathologies>

<Dataset Nickname>

  • Intended Purpose of Dataset:
  • Modality:
  • Slice Thickness:
  • Acquisition Details:
  • # of Patients:
  • Patient Demographics/Selection Details:
  • Typical # of timepoints:
  • Outcome Data:
  • Details of Reading/Markup performed:
  • Contact Person:
  • Public Availability:

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