Difference between revisions of "Ultrasound SWS Biomarker Ctte"

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{{TOCright}}
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:Co-chairs: David Fetzer, MD; Stephen McAleavey, PhD; Stephen Rosenzweig, PhD
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:RSNA Staff Support: Julie Lisiecki
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* [http://tinyurl.com/QIBA-US-SWS-Roster Roster]
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==Project Snapshot - Shear Wave Speed (SWS)==
 
==Project Snapshot - Shear Wave Speed (SWS)==
 
An Ultrasound Quantitative Biomarker Planning Meeting was held on Thursday, March 29, 2012 at the 2012 American Institute of Ultrasound in Medicine (AIUM) Annual Convention, in Phoenix, AZ.   
 
An Ultrasound Quantitative Biomarker Planning Meeting was held on Thursday, March 29, 2012 at the 2012 American Institute of Ultrasound in Medicine (AIUM) Annual Convention, in Phoenix, AZ.   
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The purpose of this meeting was to plan an effort by the biomedical ultrasound community to create and support implementation of a QIBA Profile for a quantitative biomarker in ultrasound imaging. Shear Wave Speed was selected as the qualifying biomarker at this meeting and planning efforts continue.
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T
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he purpose of this meeting was to plan an effort by the biomedical ultrasound community to create and support implementation of a QIBA Profile for a quantitative biomarker in ultrasound imaging. Shear Wave Speed was selected as the qualifying biomarker at this meeting.
 +
 
 +
Public Comment for Version 1.0 of the Profile, QIBA US Measurement of Shear Wave Speed for Estimation of Liver Fibrosis, closed December 18, 2019.
 +
 
 +
==Profile Development==
 +
Status - Consensus voting in progress - updates to Profile have been made since public comment
 +
 
 +
See Profiles page for copy of the Profile:  http://qibawiki.rsna.org/index.php/Profiles
 +
 
 +
'''Profile versions''':
  
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==Ultrasound Subcommittees==
 
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:* [[Combined: System Dependencies & Phantom Development Subcommittees]] 
 
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:* [[Clinical Applications and Biological Targets Subcommittee]]
 
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:* [[Phantom Development Subcommittee]]
 
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:* [[System Dependencies Subcommittee]] 
 
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:* [[SWS Reporting and Results Transmission Subcommittee (no charge yet provided)]]
 
  
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==Meetings/Call Summaries==
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*[[Media:QIBA_US_SWS_Profile_04.25.2022-clean version.pdf|US Shear Wave Speed for Liver Fibrosis 2022-04-25]] (clean version - Consensus vote)
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*[[Media:QIBA_US_SWS_Profile_04.25.2022-with edits.pdf|US Shear Wave Speed for Liver Fibrosis 2022-04-25]] (version with edits for Consensus vote)
  
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==2016 call summaries==
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:*[[Media:SWS Checklists-Appendix E-04.25.2022.xlsx|Appendix E: SWS Checklists]] (updated April 25, 2022)
  
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*[[Media:02 26 2016 QIBA US SWS BC Call Summary-DRAFT.pdf|02.26.2016 QIBA US SWS Biomarker Ctte Call Summary]]
 
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*[[Media:01 22 2016 QIBA US SWS BC Call Summary-FINAL-BSG.pdf|01.22.2016 QIBA US SWS Biomarker Ctte Call Summary]]
 
  
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==2015 call summaries==
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*[[Media:QIBA_US_SWS_Profile_03.19.2021-clean version.pdf|US Shear Wave Speed for Liver Fibrosis 2021-03-19]] (clean version - Consensus vote)
 +
*[[Media:QIBA_US_SWS_Profile_03.19.2021-with edits.pdf|US Shear Wave Speed for Liver Fibrosis 2021-03-19]] (version with edits for Consensus vote)
  
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*[[Media:12 11 2015 QIBA US SWS BC Call Summary-FINAL.pdf|12.11.2015 QIBA US SWS Biomarker Ctte Call Summary]]
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:*[[Media:SWS Checklists-Appendix E-03.19.2021.xlsx|Appendix E: SWS Checklists]] (updated March 19, 2021)
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*[[Media:11 06 2015 QIBA US SWS BC Call Summary-FINAL-BSG.pdf|11.06.2015 QIBA US SWS Biomarker Ctte Call Summary]]
 
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*[[Media:10 02 2015 QIBA US SWS BC Call Summary-DRAFT.pdf|10.02.2015 QIBA US SWS Biomarker Ctte Call Summary]]
 
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*[[Media:08 07 2015 QIBA US SWS BC Call Summary-FINAL-BSG.pdf|08.07.2015 QIBA US SWS Biomarker Ctte Call Summary]]
 
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*[[Media:07 10 2015 QIBA US SWS BC Call Summary-FINAL-amended.pdf|07.10.2015 QIBA US SWS Biomarker Ctte Call Summary]]
 
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*[[Media:06 12 2015 QIBA US SWS BC Call Summary-FINAL.pdf|06.12.2015 QIBA US SWS Biomarker Ctte Call Summary]]
 
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*[[Media:05 22 2015 QIBA US SWS BC Call Summary-DRAFT-2.pdf|05.22.2015 QIBA US SWS Biomarker Ctte Call Summary]]
 
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*[[Media:05 01 2015 QIBA US SWS BC Call Summary-FINAL-2.pdf|05.01.2015 QIBA US SWS Biomarker Ctte Call Summary]]
 
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*[[Media:04 10 2015 QIBA US SWS BC Call Summary-FINAL-BSG-2.pdf|04.10.2015 QIBA US SWS Biomarker Ctte Call Summary]]
 
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*[[Media:03 06 2015 QIBA US SWS BC Call Summary-DRAFT.pdf|03.06.2015 QIBA US SWS Biomarker Ctte Call Summary]]
 
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*[[Media:02 13 2015 QIBA US SWS BC Call Summary-FINAL.pdf|02.13.2015 QIBA US SWS Biomarker Ctte Call Summary]]
 
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*[[Media:01 23 2015 QIBA US SWS BC Call Summary-FINAL.pdf|01.23.2015 QIBA US SWS Biomarker Ctte Call Summary]]
 
  
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==Call Summary Archive==
 
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*[[QIBA Ultrasound SWS Call Summary Archive]]
 
  
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'''January 2021 revisions''':
 +
*[[Media:QIBA_US_SWS_Profile_01.29.2021.pdf|US Shear Wave Speed for Liver Fibrosis 2021-01-29 - revisions complete]]
 +
*[[Media:QIBA_US_SWS_Profile_01.29.2021-IP.pdf|US Shear Wave Speed for Liver Fibrosis 2021-01-29 - revisions in progress]]
  
  
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==Ultrasound Conferences==
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'''Public Comment:'''
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*[[Media:List of US 2015 conferences known-(updated 08-24-2015).doc|2015 Ultrasound Conferences with links]]
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*[[Media:QIBA_US_SWS_Profile_10.21.19.pdf|US Shear Wave Speed for Liver Fibrosis 2019-10-21]] ('''closed''' on December 18, 2019)
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*[[Media:List of US 2016-2017 conferences(updated 11-13-2015).pdf|2016-2017 Ultrasound Conferences with links]]
 
  
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==AIUM 2015==
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:*[[Media:SWS Checklists-Appendix E.xlsx|Appendix E: SWS Checklists, 2019-10-21]] ('''closed''' on December 18, 2019)
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*A joint QIBA / AIUM Ultrasound Meeting was held at the recent AIUM 2015 Annual Convention on Tuesday, March 24th  between 10:30 - 12:45 pm ET to discuss selection of a new biomarker effort for Ultrasound. 
 
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*The group discussed proposals for selection of a quantitative imaging technology and clinical target to recommend for a joint QIBA/AIUM effort to develop a quantitative ultrasound imaging biomarker profile.  
 
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*Below are meeting minutes and supporting presentations from this meeting for reference:
 
  
 +
'''''[[Working Documents Archive]]'''''
  
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'''Meeting Minutes:'''
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==SWS Task Forces==
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*[[Media:03 24 2015 QIBA-AIUM Joint Biomarker Mtg Minutes.pdf|03 24 2015 QIBA - AIUM Joint Biomarker Meeting Minutes]]
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:* [[Combined: System Dependencies & Phantom Development Subcommittees]] 
 +
:* [[Clinical Applications and Biological Targets Subcommittee]]
 +
:* [[Phantom Development Subcommittee]]
 +
:* [[System Dependencies Subcommittee]] 
 +
:* [[SWS Reporting and Results Transmission Subcommittee (no charge yet provided)]]
  
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'''Presentations and Reports from March 24, 2015 session:'''
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==Recent US-SWS Meetings==
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*[[Media:Spatial Volume Measurements.pdf|Spatial Volume Measurements - Liver Tumor Volume Estimation - presented by Dr. Garra  (Washington DC VA Medical Center / FDA)]]
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'''Approved call summaries:'''
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*[[Media:Summary of DCE-US.pdf|Summary of DCE-US - presented by Dr. Fowlkes (University of Michigan)]]
 
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*[[Media:Functional and Structural Imaging with Microbubble Contrast Agents.pdf|Functional and Structural Imaging with Microbubble Contrast Agents - presented by Dr. Eckersley  (King's College, London)]]
 
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*[[Media:Cancer Detection in Human Lymph Nodes.pdf|QUS-­Based Cancer Detection in Human Lymph Nodes - presented by Dr. Mamou  (Riverside Research Institute, NY)]]
 
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*[[Media:Carotid Volume Flow.pdf|Carotid Volume Flow - presented by Dr. J. Rubin (University of Michigan)]]
 
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*[[Media:SHAPE as a Screening Tool for Portal Hypertension.pdf|SHAPE as a Screening Tool for Portal Hypertension - presented by Dr. Forsberg  (Thomas Jefferson University)]]
 
  
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==Groundwork Projects==
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*[[Media:06 08 2022 QIBA US SWS BC Call Summary-FINAL.pdf | June 8, 2022]]
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*[[Media:05 11 2022 QIBA US SWS BC Call Summary-FINAL.pdf | May 11, 2022]]
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*[[Media:04 13 2022 QIBA US SWS BC Call Summary-FINAL.pdf | April 13, 2022]]
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*[[Media:03 09 2022 QIBA US SWS BC Call Summary-FINAL.pdf | March 9, 2022]]
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*[[Media:01 19 2022 QIBA US SWS BC Call Summary-FINAL.pdf | January 19, 2022]]
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*[[Media:12 15 2021 QIBA US SWS BC Call Summary-FINAL.pdf | December 15, 2021]]
  
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==Profile Development==
 
  
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==<font color=green>'''Tools'''</font>==
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'''''[[US SWS Call Summaries Archive]]'''''
  
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==Conferences==
 +
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*[[Media:List of 2020 Imaging-Related conferences(updated 02-14-2020).pdf|2020 Imaging-Related Conferences with links]]
  
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==<font color=green>'''Tools'''</font>==
  
 
*QIBA Mendeley Group -> Literature Database - [http://www.mendeley.com/groups/2396601/qiba-sws/ | QIBA Mendeley Group]
 
*QIBA Mendeley Group -> Literature Database - [http://www.mendeley.com/groups/2396601/qiba-sws/ | QIBA Mendeley Group]
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public group that anyone can join. If you would like a specific invitation to join, please email Dr. Palmeri.''  
 
public group that anyone can join. If you would like a specific invitation to join, please email Dr. Palmeri.''  
  
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*QIBA Elastic CIRS Phantom Simulation Data -> - [ https://github.com/RSNA-QIBA-US-SWS/QIBA-DigitalPhantoms ] - <font color=green>New data has been uploaded to the QIDW</font> { http://www.rsna.org/qidw/ }
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*QIBA Elastic CIRS Phantom Simulation Data -> - [ https://github.com/RSNA-QIBA-US-SWS/QIBA-DigitalPhantoms ] or https://zenodo.org/record/3497594
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- <font color=green>New data has been uploaded to the QIDW</font> { https://qidw.rsna.org/ }
  
 
*QIBA Finite Element Tool Repository Online & Elastic / VE Simulation Data - [ https://github.com/orgs/RSNA-QIBA-US-SWS/dashboard ]
 
*QIBA Finite Element Tool Repository Online & Elastic / VE Simulation Data - [ https://github.com/orgs/RSNA-QIBA-US-SWS/dashboard ]
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*Web browsers recommended:  ''Firefox'' ''or'' ''Google Chrome''
 
*Web browsers recommended:  ''Firefox'' ''or'' ''Google Chrome''
  
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==Working Documents==
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==US Phantoms==
 +
*Exploratory QIBA Elastic and Viscoelastic homogeneous SWS calibration liver phantoms, CIRS model 039 and prototype. 
 +
*Exploratory Volume Flow Doppler Phantom with nonparabolic flow - Sun Nuclear prototype. 
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*Research flow phantom for contrast ultrasound testing, M. Averkiou, Univ. of Wash.
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Phantom Simulation Data -> http://www.rsna.org/qidw/
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https://github.com/RSNA-QIBA-US-SWS/QIBA-DigitalPhantoms
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 +
QIBA Finite Element Tool Repository Online & Elastic / Viscoelastic Simulation Data - [https://github.com/orgs/RSNA-QIBA-US-SWS/dashboard]
 +
 
 +
==Digital Phantoms==
 +
''See ultrasound digital phantoms'':
 +
*Permanent source code for digital phantoms: https://github.com/RSNA-QIBA-US-SWS/QIBA-DigitalPhantoms(https://zenodo.org/badge/latestdoi/31222567)
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 +
*Permanent digital phantom data: https://doi.org/10.7924/r4sj1f98c (this is associated with the code above)
 +
 
 +
==Software==
 +
''See reference imaging system software:''
 +
*Verasonics scanner sequences and processing code: https://github.com/RSNA-QIBA-US-SWS/VerasonicsPhantomSequences
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 +
*Test Verasonics data for post-processing output: https://doi.org/10.7924/r4df6q75s
  
 
==Reference Materials==
 
==Reference Materials==
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'''Article citations:'''
 
'''Article citations:'''
 
* Sebastiani G, Alberti A.  How far is noninvasive assessment of liver fibrosis from replacing liver biopsy in Hepatitis C?  ''Journal of Viral Hepatitis,''2012, 19 (Suppl. 1), 18–32.  [http://www.http://www.ncbi.nlm.nih.gov/pubmed?term=Sebastiani%20G%2C%20Alberti%20A.%20%20How%20far%20is%20noninvasive%20assessment%20of%20liver%20fibrosis%20from%20%20replacing%20liver%20biopsy%20in%20Hepatitis%20C%3F%20%20Journal%20of%20Viral%20Hepatitis%2C%202012%2C%2019%20(Suppl.%201)%2C%2018%E2%80%9332. PubMed citation]
 
* Sebastiani G, Alberti A.  How far is noninvasive assessment of liver fibrosis from replacing liver biopsy in Hepatitis C?  ''Journal of Viral Hepatitis,''2012, 19 (Suppl. 1), 18–32.  [http://www.http://www.ncbi.nlm.nih.gov/pubmed?term=Sebastiani%20G%2C%20Alberti%20A.%20%20How%20far%20is%20noninvasive%20assessment%20of%20liver%20fibrosis%20from%20%20replacing%20liver%20biopsy%20in%20Hepatitis%20C%3F%20%20Journal%20of%20Viral%20Hepatitis%2C%202012%2C%2019%20(Suppl.%201)%2C%2018%E2%80%9332. PubMed citation]
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'''Funded-Project Reports:'''
 
'''Funded-Project Reports:'''
 
*[[Media:FINAL REPORT-DrSamir-QIBA Round 3 Project (2013-2014) Report.pdf|FINAL REPORT-Dr. Samir - QIBA Round 3 Project (2013-2014)- posted on 3/31/2015 for Dr. Samir (Massachusetts General Hospital / Harvard )]]
 
*[[Media:FINAL REPORT-DrSamir-QIBA Round 3 Project (2013-2014) Report.pdf|FINAL REPORT-Dr. Samir - QIBA Round 3 Project (2013-2014)- posted on 3/31/2015 for Dr. Samir (Massachusetts General Hospital / Harvard )]]
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'''Presentations and Reports:'''
 
'''Presentations and Reports:'''
  
 +
*[[Media:ITEC 2016 Clinical Workflow (10.21.2016).pdf | 2016 ITEC: RSNA-QIBA SWS Profile – What the Clinical Workflow Would look like and a Review of Biological Confounders]] ''Manish Dhyani, MD''
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*[[Media:ITEC 2016 Profile (10.21.2016).pdf | 2016 ITEC: The RSNA-QIBA SWS Profile: Current Status,Methods in Generating the Profile and a Discussion of Currently Open and Closed Issues]] ''Manish Dhyani, MD''
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*[[Media:ITEC 2016 FDA (10.21.2016).pdf | 2016 ITEC: QIBA SWS Profile Effects: Clinical, Research, Regulatory]] ''Brian Garra, MD''
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*[[Media:ITEC 2016 phantoms(10.21.2016).pdf | 2016 ITEC: RSNA-QIBA Comparison of Shear Wave Speed Estimation in Viscoelastic Phantoms]] ''Tim Hall, PhD''
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*[[Media:ITEC 2016 QIBA US Overview(10.21.2016).pdf | 2016 ITEC: Overview of QIBA Ultrasound Activity]] ''Tim Hall, PhD''
 
*[[Media:Poster_IEEE2015_QIBA_(11.06.2015).pdf|2015 IEEE International Ultrasonics Symposium Poster: RSNA /QIBA Ultrasound Shear Wave Speed Phase II Phantom Study in Viscoelastic Media]]  
 
*[[Media:Poster_IEEE2015_QIBA_(11.06.2015).pdf|2015 IEEE International Ultrasonics Symposium Poster: RSNA /QIBA Ultrasound Shear Wave Speed Phase II Phantom Study in Viscoelastic Media]]  
 
*[[Media:CIRS E2250 Phantom Measurements.pdf|CIRS E2250 Phantom Measurements- presented on 7/11/2014 by Dr. Mark Palmeri (Duke University)]]
 
*[[Media:CIRS E2250 Phantom Measurements.pdf|CIRS E2250 Phantom Measurements- presented on 7/11/2014 by Dr. Mark Palmeri (Duke University)]]
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*[[Media: QIBA Ultrasound Biomarkers Meeting, 03.29.2012-Dr. Rognin.pdf|QIBA Ultrasound Biomarkers Meeting, 03.29.2012-Dr. Rognin Presentation]]
 
*[[Media: QIBA Ultrasound Biomarkers Meeting, 03.29.2012-Dr. Rognin.pdf|QIBA Ultrasound Biomarkers Meeting, 03.29.2012-Dr. Rognin Presentation]]
 
*[[Media: QIBA Ultrasound Biomarkers Meeting, 03.29.2012-Dr. Rubin.pdf|QIBA Ultrasound Biomarkers Meeting, 03.29.2012-Dr. Rubin Presentation]]
 
*[[Media: QIBA Ultrasound Biomarkers Meeting, 03.29.2012-Dr. Rubin.pdf|QIBA Ultrasound Biomarkers Meeting, 03.29.2012-Dr. Rubin Presentation]]
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==QIBA Funded Projects==
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====Round 3====
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*[[Media:Phase 2 Phantom Study with Inelastic, SWS-Dispersive Media.pdf | Project (D) Phase 2 Phantom Study with Inelastic, SWS-Dispersive Media (University of Wisconsin - Madison)]]
 +
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*[[Media:A Pilot Study of the Effect of Steatosis and Inflammation on Shear Wave Speed for the Estimation of Liver Fibrosis Stage in Patients with Diffuse Liver Disease.pdf | Project (I) A Pilot Study of the Effect of Steatosis and Inflammation on Shear Wave Speed for the Estimation of Liver Fibrosis Stage in Patients with Diffuse Liver Disease (Massachusetts General Hospital)]]
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*[[Media:Numerical Simulation of Shear Wave Speed Measurements in the Liver.pdf | Project (K) Numerical Simulation of Shear Wave Speed Measurements in the Liver (Duke University)]]
 +
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====Round 4====
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*[[Media:Beyond Confounders-Addressing Sources of Measurement Variability and Error in Shear Wave Elastography.pdf | Project (W) Beyond Confounders-Addressing Sources of Measurement Variability and Error in Shear Wave Elastography (Massachusetts General Hospital)]]
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*[[Media:Development and Validation of Simulations and Phantoms Mimicking the Viscoelastic Properties of Human Liver.pdf | Project (Z) Development and Validation of Simulations and Phantoms Mimicking the Viscoelastic Properties of Human Liver (Duke University)]]
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====Round 5====
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*[[Media:Analysis of Sources of US SWS Measurement Inter-System Variability.pdf | Project (F) Analysis of Sources of US SWS Measurement Inter-System Variability (Duke University)]]

Revision as of 18:37, 26 May 2022

Co-chairs: David Fetzer, MD; Stephen McAleavey, PhD; Stephen Rosenzweig, PhD
RSNA Staff Support: Julie Lisiecki

Project Snapshot - Shear Wave Speed (SWS)

An Ultrasound Quantitative Biomarker Planning Meeting was held on Thursday, March 29, 2012 at the 2012 American Institute of Ultrasound in Medicine (AIUM) Annual Convention, in Phoenix, AZ. T he purpose of this meeting was to plan an effort by the biomedical ultrasound community to create and support implementation of a QIBA Profile for a quantitative biomarker in ultrasound imaging. Shear Wave Speed was selected as the qualifying biomarker at this meeting.

Public Comment for Version 1.0 of the Profile, QIBA US Measurement of Shear Wave Speed for Estimation of Liver Fibrosis, closed December 18, 2019.

Profile Development

Status - Consensus voting in progress - updates to Profile have been made since public comment

See Profiles page for copy of the Profile: http://qibawiki.rsna.org/index.php/Profiles

Profile versions:




January 2021 revisions:


Public Comment:

Working Documents Archive

SWS Task Forces

Recent US-SWS Meetings

Approved call summaries:


US SWS Call Summaries Archive

Conferences

Tools

Literature for this the QIBA SWS Biomarker Committee has been compiled using Mendeley, and is called 'QIBA SWS'. This is a public group that anyone can join. If you would like a specific invitation to join, please email Dr. Palmeri.

- New data has been uploaded to the QIDW { https://qidw.rsna.org/ }

  • Web browsers recommended: Firefox or Google Chrome

US Phantoms

  • Exploratory QIBA Elastic and Viscoelastic homogeneous SWS calibration liver phantoms, CIRS model 039 and prototype.
  • Exploratory Volume Flow Doppler Phantom with nonparabolic flow - Sun Nuclear prototype.
  • Research flow phantom for contrast ultrasound testing, M. Averkiou, Univ. of Wash.

Phantom Simulation Data -> http://www.rsna.org/qidw/ https://github.com/RSNA-QIBA-US-SWS/QIBA-DigitalPhantoms

QIBA Finite Element Tool Repository Online & Elastic / Viscoelastic Simulation Data - [1]

Digital Phantoms

See ultrasound digital phantoms:

Software

See reference imaging system software:

Reference Materials

Article citations:

  • Sebastiani G, Alberti A. How far is noninvasive assessment of liver fibrosis from replacing liver biopsy in Hepatitis C? Journal of Viral Hepatitis,2012, 19 (Suppl. 1), 18–32. PubMed citation

Funded-Project Reports:

Presentations and Reports:

QIBA Funded Projects

Round 3

Round 4

Round 5

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