Difference between revisions of "Ultrasound SWS Biomarker Ctte"

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{{TOCright}}
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:Co-chairs: David Fetzer, MD; Stephen McAleavey, PhD; Stephen Rosenzweig, PhD
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:RSNA Staff Support: Julie Lisiecki
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* [http://tinyurl.com/QIBA-US-SWS-Roster Roster]
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==Project Snapshot - Shear Wave Speed (SWS)==
 
==Project Snapshot - Shear Wave Speed (SWS)==
 
An Ultrasound Quantitative Biomarker Planning Meeting was held on Thursday, March 29, 2012 at the 2012 American Institute of Ultrasound in Medicine (AIUM) Annual Convention, in Phoenix, AZ.   
 
An Ultrasound Quantitative Biomarker Planning Meeting was held on Thursday, March 29, 2012 at the 2012 American Institute of Ultrasound in Medicine (AIUM) Annual Convention, in Phoenix, AZ.   
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The purpose of this meeting was to plan an effort by the biomedical ultrasound community to create and support implementation of a QIBA Profile for a quantitative biomarker in ultrasound imaging. Shear Wave Speed was selected as the qualifying biomarker at this meeting and planning efforts continue.
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T
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he purpose of this meeting was to plan an effort by the biomedical ultrasound community to create and support implementation of a QIBA Profile for a quantitative biomarker in ultrasound imaging. Shear Wave Speed was selected as the qualifying biomarker at this meeting.
  
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==Ultrasound Subcommittees==
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Public Comment for Version 1.0 of the Profile, QIBA US Measurement of Shear Wave Speed for Estimation of Liver Fibrosis, closed December 18, 2019.
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:* [[Combined: System Dependencies & Phantom Development Subcommittees]] 
 
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:* [[Clinical Applications and Biological Targets Subcommittee]]
 
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:* [[Phantom Development Subcommittee]]
 
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:* [[System Dependencies Subcommittee]] 
 
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:* [[SWS Reporting and Results Transmission Subcommittee (no charge yet provided)]]
 
  
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==Meetings/Call Summaries==
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==Profile Development==
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Status - Consensus voting in progress - updates to Profile have been made since public comment
  
 +
See Profiles page for copy of the Profile:  http://qibawiki.rsna.org/index.php/Profiles
  
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==2015 call summaries==
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'''Profile versions''':
  
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*[[Media:03 06 2015 QIBA US SWS BC Call Summary-DRAFT.pdf|03.06.2015 QIBA US SWS Biomarker Ctte Call Summary]]
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*[[Media:QIBA_US_SWS_Profile_03.19.2021-clean version.pdf|US Shear Wave Speed for Liver Fibrosis 2021-03-19]] (clean version - Consensus vote)
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*[[Media:02 13 2015 QIBA US SWS BC Call Summary-FINAL.pdf|02.13.2015 QIBA US SWS Biomarker Ctte Call Summary]]
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*[[Media:QIBA_US_SWS_Profile_03.19.2021-with edits.pdf|US Shear Wave Speed for Liver Fibrosis 2021-03-19]] (version with edits for Consensus vote)
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*[[Media:01 23 2015 QIBA US SWS BC Call Summary-FINAL.pdf|01.23.2015 QIBA US SWS Biomarker Ctte Call Summary]]
 
  
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==2014 call summaries==
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:*[[Media:SWS Checklists-Appendix E-03.19.2021.xlsx|Appendix E: SWS Checklists]] (updated March 19, 2021)
  
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*[[Media:12 12 2014 QIBA US SWS BC Call Summary-FINAL.pdf|12.12.2014 QIBA US SWS Biomarker Ctte Call Summary]]
 
  
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*[[Media:11 14 2014 QIBA US SWS BC Call Summary-DRAFT.pdf|11.14.2014 QIBA US SWS Biomarker Ctte Call Summary]]
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'''January 2021 revisions''':
 +
*[[Media:QIBA_US_SWS_Profile_01.29.2021.pdf|US Shear Wave Speed for Liver Fibrosis 2021-01-29 - revisions complete]]
 +
*[[Media:QIBA_US_SWS_Profile_01.29.2021-IP.pdf|US Shear Wave Speed for Liver Fibrosis 2021-01-29 - revisions in progress]]  
  
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*[[Media:10 10 2014 QIBA US SWS BC Call Summary-FINAL.pdf|10.10.2014 QIBA US SWS Biomarker Ctte Call Summary]]
 
  
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*[[Media:09 12 2014 QIBA US SWS TC Call Summary-FINAL-AM.pdf|09.12.2014 QIBA US SWS Tech Ctte Call Summary]]
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'''Public Comment:'''
 +
*[[Media:QIBA_US_SWS_Profile_10.21.19.pdf|US Shear Wave Speed for Liver Fibrosis 2019-10-21]] ('''closed''' on December 18, 2019)
  
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*[[Media:08 15 2014 QIBA US SWS TC Call Summary-FINAL.pdf|08.15.2014 QIBA US SWS Tech Ctte Call Summary]]
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:*[[Media:SWS Checklists-Appendix E.xlsx|Appendix E: SWS Checklists, 2019-10-21]] ('''closed''' on December 18, 2019)
  
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*[[Media:07 18 2014 QIBA US SWS TC Call Summary-DRAFT.pdf|07.18.2014 QIBA US SWS Tech Ctte Call Summary]]
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'''''[[Working Documents Archive]]'''''
  
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* No call for June due to UITC Symposium
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==SWS Task Forces==
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:* [[Combined: System Dependencies & Phantom Development Subcommittees]] 
 +
:* [[Clinical Applications and Biological Targets Subcommittee]]
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:* [[Phantom Development Subcommittee]]
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:* [[System Dependencies Subcommittee]] 
 +
:* [[SWS Reporting and Results Transmission Subcommittee (no charge yet provided)]]
  
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*[[Media:05 09 2014 QIBA US SWS TC Call Summary-DRAFT.pdf|05.09.2014 QIBA US SWS Tech Ctte Call Summary]]
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==Recent US-SWS Meetings==
 +
'''Approved call summaries:'''
  
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*[[Media:04 11 2014 QIBA US SWS TC Call Summary-DRAFT.pdf|04.11.2014 QIBA US SWS Tech Ctte Call Summary]]
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*[[Media:08 18 2021 QIBA US SWS BC Call Summary-FINAL-DF.pdf | August 18, 2021]]
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*[[Media:07 21 2021 QIBA US SWS BC Call Summary-FINAL.pdf | July 21, 2021]]
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*[[Media:05 19 2021 QIBA US SWS BC Call Summary-FINAL-2.pdf | May 19, 2021]]
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*[[Media:03 19 2021 QIBA US SWS BC Call Summary-FINAL-2.pdf | March 19, 2021]]
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*[[Media:01 22 2021 QIBA US SWS BC Call Summary-FINAL.pdf | January 22, 2021]]
  
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*[[Media:03 14 2014 QIBA US SWS TC Call Summary-DRAFT.pdf|03.14.2014 QIBA US SWS Tech Ctte Call Summary]]
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*[[Media:11 20 2020 QIBA US SWS BC Call Summary-FINAL.pdf | November 20, 2020]]
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*[[Media:09 11 2020 QIBA US SWS BC Call Summary-FINAL.pdf | September 11, 2020]]
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*[[Media:06 05 2020 QIBA US SWS BC Call Summary-FINAL.pdf | June 5, 2020]]
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*[[Media:02 07 2020 QIBA US SWS BC Call Summary-FINAL.pdf | February 7, 2020]]
  
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*[[Media:02 10 2014 QIBA US SWS TC Call Summary-FINAL-BG-PC2.pdf|02.10.2014 QIBA US SWS Tech Ctte Call Summary]]
 
  
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*[[Media:01 10 2014 QIBA US SWS TC Call Summary FINAL.pdf|01.10.2014 QIBA US SWS Tech Ctte Call Summary]]
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'''''[[US SWS Call Summaries Archive]]'''''
  
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==Call Summary Archive==
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==Conferences==
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*[[QIBA Ultrasound SWS Call Summary Archive]]
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 +
*[[Media:List of 2020 Imaging-Related conferences(updated 02-14-2020).pdf|2020 Imaging-Related Conferences with links]]
  
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====call schedule====
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==<font color=green>'''Tools'''</font>==
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*[[Media:US SWS call schedule model.png|QIBA US SWS call schedule model.png]]
 
  
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==Ultrasound Conferences==
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*QIBA Mendeley Group -> Literature Database - [http://www.mendeley.com/groups/2396601/qiba-sws/ | QIBA Mendeley Group]
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*[[Media:List of US 2015 conferences known-(updated 03-11-2015).doc|List of 2015 Ultrasound Conferences known with links]]
 
  
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==AIUM 2015==
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''Literature for this the QIBA SWS Biomarker Committee has been compiled using Mendeley, and is called 'QIBA SWS'. ''This is a  
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*A joint QIBA / AIUM Ultrasound Meeting was held at the recent AIUM 2015 Annual Convention on Tuesday, March 24th  between 10:30 - 12:45 pm ET to discuss selection of a new biomarker effort for Ultrasound. 
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public group that anyone can join. If you would like a specific invitation to join, please email Dr. Palmeri.''
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*The group discussed proposals for selection of a quantitative imaging technology and clinical target to recommend for a joint QIBA/AIUM effort to develop a quantitative ultrasound imaging biomarker profile.  
 
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*Below are meeting minutes and supporting presentations from this meeting for reference:
 
  
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'''Meeting Minutes:'''
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*QIBA Elastic CIRS Phantom Simulation Data -> - [ https://github.com/RSNA-QIBA-US-SWS/QIBA-DigitalPhantoms ] or https://zenodo.org/record/3497594
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*[[Media:03 24 2015 QIBA-AIUM Joint Biomarker Mtg Minutes.pdf|03 24 2015 QIBA - AIUM Joint Biomarker Meeting Minutes]]
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- <font color=green>New data has been uploaded to the QIDW</font> {  https://qidw.rsna.org/ }
  
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'''Presentations and Reports:'''
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*QIBA Finite Element Tool Repository Online & Elastic / VE Simulation Data - [ https://github.com/orgs/RSNA-QIBA-US-SWS/dashboard ]
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*[[Media:x.pdf|x - presented on 3/24/2015 by Dr. x x (Duke University)]]
 
  
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==Groundwork Projects==
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*Web browsers recommended:  ''Firefox'' ''or'' ''Google Chrome''
  
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==Profile Development==
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==US Phantoms==
 +
*Exploratory QIBA Elastic and Viscoelastic homogeneous SWS calibration liver phantoms, CIRS model 039 and prototype. 
 +
*Exploratory Volume Flow Doppler Phantom with nonparabolic flow - Sun Nuclear prototype. 
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*Research flow phantom for contrast ultrasound testing, M. Averkiou, Univ. of Wash.
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Phantom Simulation Data -> http://www.rsna.org/qidw/
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https://github.com/RSNA-QIBA-US-SWS/QIBA-DigitalPhantoms
  
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==Tools==
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QIBA Finite Element Tool Repository Online & Elastic / Viscoelastic Simulation Data - [https://github.com/orgs/RSNA-QIBA-US-SWS/dashboard]
  
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==Digital Phantoms==
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''See ultrasound digital phantoms'':
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*Permanent source code for digital phantoms: https://github.com/RSNA-QIBA-US-SWS/QIBA-DigitalPhantoms(https://zenodo.org/badge/latestdoi/31222567)
  
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*Permanent digital phantom data: https://doi.org/10.7924/r4sj1f98c (this is associated with the code above)
  
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*QIBA Mendeley Group -> Literature Database - [http://www.mendeley.com/groups/2396601/qiba-sws/ | QIBA Mendeley Group]
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==Software==
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''See reference imaging system software:''
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''Literature for this the QIBA SWS Technical Committee has been compiled using Mendeley, and is called 'QIBA SWS'. ''This is a
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*Verasonics scanner sequences and processing code: https://github.com/RSNA-QIBA-US-SWS/VerasonicsPhantomSequences
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public group that anyone can join. If you would like a specific invitation to join, please email Dr. Palmeri.''
 
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*QIBA Elastic CIRS Phantom Simulation Data -> Public Web Server - [http://dukemil.egr.duke.edu/qiba/cirs_elastic_fem/ | http://dukemil.egr.duke.edu/qiba/cirs_elastic_fem/]
 
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*QIBA Finite Element Tool Repository Online & Elastic / VE Simulation Data - [https://github.com/RSNA-QIBA-US-SWS/fem.git | https://github.com/RSNA-QIBA-US-SWS/fem.git ]
 
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*Web browsers recommended:  ''Firefox'' ''or'' ''Google Chrome''
 
  
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==Working Documents==
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*Test Verasonics data for post-processing output: https://doi.org/10.7924/r4df6q75s
  
 
==Reference Materials==
 
==Reference Materials==
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'''Article citations:'''
 
'''Article citations:'''
 
* Sebastiani G, Alberti A.  How far is noninvasive assessment of liver fibrosis from replacing liver biopsy in Hepatitis C?  ''Journal of Viral Hepatitis,''2012, 19 (Suppl. 1), 18–32.  [http://www.http://www.ncbi.nlm.nih.gov/pubmed?term=Sebastiani%20G%2C%20Alberti%20A.%20%20How%20far%20is%20noninvasive%20assessment%20of%20liver%20fibrosis%20from%20%20replacing%20liver%20biopsy%20in%20Hepatitis%20C%3F%20%20Journal%20of%20Viral%20Hepatitis%2C%202012%2C%2019%20(Suppl.%201)%2C%2018%E2%80%9332. PubMed citation]
 
* Sebastiani G, Alberti A.  How far is noninvasive assessment of liver fibrosis from replacing liver biopsy in Hepatitis C?  ''Journal of Viral Hepatitis,''2012, 19 (Suppl. 1), 18–32.  [http://www.http://www.ncbi.nlm.nih.gov/pubmed?term=Sebastiani%20G%2C%20Alberti%20A.%20%20How%20far%20is%20noninvasive%20assessment%20of%20liver%20fibrosis%20from%20%20replacing%20liver%20biopsy%20in%20Hepatitis%20C%3F%20%20Journal%20of%20Viral%20Hepatitis%2C%202012%2C%2019%20(Suppl.%201)%2C%2018%E2%80%9332. PubMed citation]
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'''Funded-Project Reports:'''
 
'''Funded-Project Reports:'''
 
*[[Media:FINAL REPORT-DrSamir-QIBA Round 3 Project (2013-2014) Report.pdf|FINAL REPORT-Dr. Samir - QIBA Round 3 Project (2013-2014)- posted on 3/31/2015 for Dr. Samir (Massachusetts General Hospital / Harvard )]]
 
*[[Media:FINAL REPORT-DrSamir-QIBA Round 3 Project (2013-2014) Report.pdf|FINAL REPORT-Dr. Samir - QIBA Round 3 Project (2013-2014)- posted on 3/31/2015 for Dr. Samir (Massachusetts General Hospital / Harvard )]]
  
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'''Presentations and Reports:'''
  
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'''Presentations and Reports:'''
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*[[Media:ITEC 2016 Clinical Workflow (10.21.2016).pdf | 2016 ITEC: RSNA-QIBA SWS Profile – What the Clinical Workflow Would look like and a Review of Biological Confounders]] ''Manish Dhyani, MD''
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*[[Media:ITEC 2016 Profile (10.21.2016).pdf | 2016 ITEC: The RSNA-QIBA SWS Profile: Current Status,Methods in Generating the Profile and a Discussion of Currently Open and Closed Issues]] ''Manish Dhyani, MD''
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*[[Media:ITEC 2016 FDA (10.21.2016).pdf | 2016 ITEC: QIBA SWS Profile Effects: Clinical, Research, Regulatory]] ''Brian Garra, MD''
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*[[Media:ITEC 2016 phantoms(10.21.2016).pdf | 2016 ITEC: RSNA-QIBA Comparison of Shear Wave Speed Estimation in Viscoelastic Phantoms]] ''Tim Hall, PhD''
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*[[Media:ITEC 2016 QIBA US Overview(10.21.2016).pdf | 2016 ITEC: Overview of QIBA Ultrasound Activity]] ''Tim Hall, PhD''
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*[[Media:Poster_IEEE2015_QIBA_(11.06.2015).pdf|2015 IEEE International Ultrasonics Symposium Poster: RSNA /QIBA Ultrasound Shear Wave Speed Phase II Phantom Study in Viscoelastic Media]]
 
*[[Media:CIRS E2250 Phantom Measurements.pdf|CIRS E2250 Phantom Measurements- presented on 7/11/2014 by Dr. Mark Palmeri (Duke University)]]
 
*[[Media:CIRS E2250 Phantom Measurements.pdf|CIRS E2250 Phantom Measurements- presented on 7/11/2014 by Dr. Mark Palmeri (Duke University)]]
 
*[[Media:Comparison of Viscoelastic Properties of CIRS Phantoms and Human Liver Ned.pdf|Comparison of Viscoelastic Properties of CIRS Phantoms and the Human Liver - presented on 3/21/2014 by Dr. Ned Rouze (Duke University)]]
 
*[[Media:Comparison of Viscoelastic Properties of CIRS Phantoms and Human Liver Ned.pdf|Comparison of Viscoelastic Properties of CIRS Phantoms and the Human Liver - presented on 3/21/2014 by Dr. Ned Rouze (Duke University)]]
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*[[Media: QIBA Ultrasound Biomarkers Meeting, 03.29.2012-Dr. Rognin.pdf|QIBA Ultrasound Biomarkers Meeting, 03.29.2012-Dr. Rognin Presentation]]
 
*[[Media: QIBA Ultrasound Biomarkers Meeting, 03.29.2012-Dr. Rognin.pdf|QIBA Ultrasound Biomarkers Meeting, 03.29.2012-Dr. Rognin Presentation]]
 
*[[Media: QIBA Ultrasound Biomarkers Meeting, 03.29.2012-Dr. Rubin.pdf|QIBA Ultrasound Biomarkers Meeting, 03.29.2012-Dr. Rubin Presentation]]
 
*[[Media: QIBA Ultrasound Biomarkers Meeting, 03.29.2012-Dr. Rubin.pdf|QIBA Ultrasound Biomarkers Meeting, 03.29.2012-Dr. Rubin Presentation]]
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==QIBA Funded Projects==
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====Round 3====
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*[[Media:Phase 2 Phantom Study with Inelastic, SWS-Dispersive Media.pdf | Project (D) Phase 2 Phantom Study with Inelastic, SWS-Dispersive Media (University of Wisconsin - Madison)]]
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*[[Media:A Pilot Study of the Effect of Steatosis and Inflammation on Shear Wave Speed for the Estimation of Liver Fibrosis Stage in Patients with Diffuse Liver Disease.pdf | Project (I) A Pilot Study of the Effect of Steatosis and Inflammation on Shear Wave Speed for the Estimation of Liver Fibrosis Stage in Patients with Diffuse Liver Disease (Massachusetts General Hospital)]]
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*[[Media:Numerical Simulation of Shear Wave Speed Measurements in the Liver.pdf | Project (K) Numerical Simulation of Shear Wave Speed Measurements in the Liver (Duke University)]]
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====Round 4====
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*[[Media:Beyond Confounders-Addressing Sources of Measurement Variability and Error in Shear Wave Elastography.pdf | Project (W) Beyond Confounders-Addressing Sources of Measurement Variability and Error in Shear Wave Elastography (Massachusetts General Hospital)]]
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*[[Media:Development and Validation of Simulations and Phantoms Mimicking the Viscoelastic Properties of Human Liver.pdf | Project (Z) Development and Validation of Simulations and Phantoms Mimicking the Viscoelastic Properties of Human Liver (Duke University)]]
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====Round 5====
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*[[Media:Analysis of Sources of US SWS Measurement Inter-System Variability.pdf | Project (F) Analysis of Sources of US SWS Measurement Inter-System Variability (Duke University)]]

Revision as of 14:52, 24 August 2021

Co-chairs: David Fetzer, MD; Stephen McAleavey, PhD; Stephen Rosenzweig, PhD
RSNA Staff Support: Julie Lisiecki

Project Snapshot - Shear Wave Speed (SWS)

An Ultrasound Quantitative Biomarker Planning Meeting was held on Thursday, March 29, 2012 at the 2012 American Institute of Ultrasound in Medicine (AIUM) Annual Convention, in Phoenix, AZ. T he purpose of this meeting was to plan an effort by the biomedical ultrasound community to create and support implementation of a QIBA Profile for a quantitative biomarker in ultrasound imaging. Shear Wave Speed was selected as the qualifying biomarker at this meeting.

Public Comment for Version 1.0 of the Profile, QIBA US Measurement of Shear Wave Speed for Estimation of Liver Fibrosis, closed December 18, 2019.

Profile Development

Status - Consensus voting in progress - updates to Profile have been made since public comment

See Profiles page for copy of the Profile: http://qibawiki.rsna.org/index.php/Profiles

Profile versions:


January 2021 revisions:


Public Comment:

Working Documents Archive

SWS Task Forces

Recent US-SWS Meetings

Approved call summaries:


US SWS Call Summaries Archive

Conferences

Tools

Literature for this the QIBA SWS Biomarker Committee has been compiled using Mendeley, and is called 'QIBA SWS'. This is a public group that anyone can join. If you would like a specific invitation to join, please email Dr. Palmeri.

- New data has been uploaded to the QIDW { https://qidw.rsna.org/ }

  • Web browsers recommended: Firefox or Google Chrome

US Phantoms

  • Exploratory QIBA Elastic and Viscoelastic homogeneous SWS calibration liver phantoms, CIRS model 039 and prototype.
  • Exploratory Volume Flow Doppler Phantom with nonparabolic flow - Sun Nuclear prototype.
  • Research flow phantom for contrast ultrasound testing, M. Averkiou, Univ. of Wash.

Phantom Simulation Data -> http://www.rsna.org/qidw/ https://github.com/RSNA-QIBA-US-SWS/QIBA-DigitalPhantoms

QIBA Finite Element Tool Repository Online & Elastic / Viscoelastic Simulation Data - [1]

Digital Phantoms

See ultrasound digital phantoms:

Software

See reference imaging system software:

Reference Materials

Article citations:

  • Sebastiani G, Alberti A. How far is noninvasive assessment of liver fibrosis from replacing liver biopsy in Hepatitis C? Journal of Viral Hepatitis,2012, 19 (Suppl. 1), 18–32. PubMed citation

Funded-Project Reports:

Presentations and Reports:

QIBA Funded Projects

Round 3

Round 4

Round 5

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