Difference between revisions of "Category:Datasets"
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| − | ''<We might eventually create individual pages for each dataset, but for now we don't have a normalized format so put them all here.>'' | + | ''<We might eventually create individual pages for each dataset with an index table linking to them from here, but for now we don't have a normalized format so put them all here.>'' |
This is a catalog of imaging datasets of interest to QIBA. | This is a catalog of imaging datasets of interest to QIBA. | ||
| Line 5: | Line 5: | ||
Please feel free to correct, edit and provide supplemental information. | Please feel free to correct, edit and provide supplemental information. | ||
| − | ==< | + | ==Lung Nodules== |
| + | |||
| + | ===National Biomedical Imaging Archive Databases=== | ||
| + | |||
| + | [https://imaging.nci.nih.gov/ncia/login.jsf NBIA Log-in Page] | ||
| + | |||
| + | *From the above NBIA link, it is possible to log-in or register as a NBIA user | ||
| + | *Once logged in, click on '''Search Images''' | ||
| + | *Filter as follows for the 32 MSK Coffee Break Datasets: | ||
| + | **Collection(s):'''RIDER''' | ||
| + | **'''Available on NBIA''' | ||
| + | **From (mm/dd/yyyy): '''07/17/2009''' to '''07/17/2009''' | ||
| + | **Submit | ||
| + | **Follow prompts to 32 MSK Coffee Break CT Image Sets | ||
| + | |||
| + | ===RIDER CT Clinical=== | ||
| + | * '''Intended Purpose of Dataset''': evaluate ability to measure tumor change | ||
| + | |||
| + | * '''Modality''': CT | ||
| + | * '''Slice Thickness''': mostly 5mm (few with thin slice <1.5mm) | ||
| + | * '''Acquisition Details''': | ||
| + | |||
| + | * '''# of Patients''': 300 (as of Sept 2008) | ||
| + | * '''Patient Demographics/Selection Details''': | ||
| + | * '''Typical # of timepoints''': most with multiple, includes "coffee break"/"no change" | ||
| + | * '''Outcome Data''': None | ||
| + | |||
| + | * '''Details of Reading/Markup performed''': No Contours, limited set annotated by two readers with RECIST markings | ||
| + | |||
| + | * '''Contact Person''': | ||
| + | * '''Public Availability''': on NCIA | ||
| + | |||
| + | * '''Description''': | ||
| + | |||
| + | ===LIRC=== | ||
| + | * '''Intended Purpose of Dataset''': Comparing computer vs reader volumetric measurements | ||
| + | |||
| + | * '''Modality''': CT | ||
| + | * '''Slice Thickness''': 50% "thick"/50% "thin" | ||
| + | * '''Acquisition Details''': | ||
| + | |||
| + | * '''# of Patients''': 84 (as of Oct 2008) | ||
| + | * '''Patient Demographics/Selection Details''': | ||
| + | * '''Typical # of timepoints''': Single | ||
| + | * '''Outcome Data''': None | ||
| + | |||
| + | * '''Details of Reading/Markup performed''': Contours available for all 3mm diameter nodules; Four radiologists marked up each case; possible issues with over/under segmentation | ||
| + | |||
| + | * '''Contact Person''': | ||
| + | * '''Public Availability''': at NCI | ||
| + | |||
| + | |||
| + | ==<Other Pathologies>== | ||
===<Dataset Nickname>=== | ===<Dataset Nickname>=== | ||
| Line 16: | Line 68: | ||
* '''# of Patients''': | * '''# of Patients''': | ||
* '''Patient Demographics/Selection Details''': | * '''Patient Demographics/Selection Details''': | ||
| − | * ''' | + | * '''Typical # of timepoints''': |
| + | * '''Outcome Data''': | ||
* '''Details of Reading/Markup performed''': | * '''Details of Reading/Markup performed''': | ||
| + | |||
| + | * '''Contact Person''': | ||
| + | * '''Public Availability''': | ||
Latest revision as of 20:34, 1 September 2009
<We might eventually create individual pages for each dataset with an index table linking to them from here, but for now we don't have a normalized format so put them all here.>
This is a catalog of imaging datasets of interest to QIBA.
Please feel free to correct, edit and provide supplemental information.
Lung Nodules
National Biomedical Imaging Archive Databases
- From the above NBIA link, it is possible to log-in or register as a NBIA user
- Once logged in, click on Search Images
- Filter as follows for the 32 MSK Coffee Break Datasets:
- Collection(s):RIDER
- Available on NBIA
- From (mm/dd/yyyy): 07/17/2009 to 07/17/2009
- Submit
- Follow prompts to 32 MSK Coffee Break CT Image Sets
RIDER CT Clinical
- Intended Purpose of Dataset: evaluate ability to measure tumor change
- Modality: CT
- Slice Thickness: mostly 5mm (few with thin slice <1.5mm)
- Acquisition Details:
- # of Patients: 300 (as of Sept 2008)
- Patient Demographics/Selection Details:
- Typical # of timepoints: most with multiple, includes "coffee break"/"no change"
- Outcome Data: None
- Details of Reading/Markup performed: No Contours, limited set annotated by two readers with RECIST markings
- Contact Person:
- Public Availability: on NCIA
- Description:
LIRC
- Intended Purpose of Dataset: Comparing computer vs reader volumetric measurements
- Modality: CT
- Slice Thickness: 50% "thick"/50% "thin"
- Acquisition Details:
- # of Patients: 84 (as of Oct 2008)
- Patient Demographics/Selection Details:
- Typical # of timepoints: Single
- Outcome Data: None
- Details of Reading/Markup performed: Contours available for all 3mm diameter nodules; Four radiologists marked up each case; possible issues with over/under segmentation
- Contact Person:
- Public Availability: at NCI
<Other Pathologies>
<Dataset Nickname>
- Intended Purpose of Dataset:
- Modality:
- Slice Thickness:
- Acquisition Details:
- # of Patients:
- Patient Demographics/Selection Details:
- Typical # of timepoints:
- Outcome Data:
- Details of Reading/Markup performed:
- Contact Person:
- Public Availability:
This category currently contains no pages or media.