Category:Datasets: Difference between revisions

Latest revision as of 20:34, 1 September 2009

<We might eventually create individual pages for each dataset with an index table linking to them from here, but for now we don't have a normalized format so put them all here.>

This is a catalog of imaging datasets of interest to QIBA.

Please feel free to correct, edit and provide supplemental information.

Lung Nodules

National Biomedical Imaging Archive Databases

NBIA Log-in Page

From the above NBIA link, it is possible to log-in or register as a NBIA user
Once logged in, click on Search Images
Filter as follows for the 32 MSK Coffee Break Datasets:
- Collection(s):RIDER
- Available on NBIA
- From (mm/dd/yyyy): 07/17/2009 to 07/17/2009
- Submit
- Follow prompts to 32 MSK Coffee Break CT Image Sets

RIDER CT Clinical

Intended Purpose of Dataset: evaluate ability to measure tumor change

Modality: CT
Slice Thickness: mostly 5mm (few with thin slice <1.5mm)
Acquisition Details:

# of Patients: 300 (as of Sept 2008)
Patient Demographics/Selection Details:
Typical # of timepoints: most with multiple, includes "coffee break"/"no change"
Outcome Data: None

Details of Reading/Markup performed: No Contours, limited set annotated by two readers with RECIST markings

Contact Person:
Public Availability: on NCIA

Description:

LIRC

Intended Purpose of Dataset: Comparing computer vs reader volumetric measurements

Modality: CT
Slice Thickness: 50% "thick"/50% "thin"
Acquisition Details:

# of Patients: 84 (as of Oct 2008)
Patient Demographics/Selection Details:
Typical # of timepoints: Single
Outcome Data: None

Details of Reading/Markup performed: Contours available for all 3mm diameter nodules; Four radiologists marked up each case; possible issues with over/under segmentation

Contact Person:
Public Availability: at NCI

<Other Pathologies>

<Dataset Nickname>

Intended Purpose of Dataset:

Modality:
Slice Thickness:
Acquisition Details:

# of Patients:
Patient Demographics/Selection Details:
Typical # of timepoints:
Outcome Data:

Details of Reading/Markup performed:

Contact Person:
Public Availability:

This category currently contains no pages or media.

@@ Line 5: / Line 5: @@
 Please feel free to correct, edit and provide supplemental information.
-==<Related Pathology, e.g. Lung Nodules>==
+==Lung Nodules==
-===<Dataset Nickname>===
+===National Biomedical Imaging Archive Databases===
-* '''Intended Purpose of Dataset''':
-* '''Modality''':
+[https://imaging.nci.nih.gov/ncia/login.jsf NBIA Log-in Page]
-* '''Slice Thickness''':
-* '''Acquisition Details''':
-* '''# of Patients''':
-* '''Patient Demographics/Selection Details''':
-* '''Typical # of timepoints''':
-* '''Outcome Data''':
-* '''Details of Reading/Markup performed''':
-* '''Contact Person''':
-* '''Public Availability''':
+*From the above NBIA link, it is possible to log-in or register as a NBIA user
+*Once logged in, click on '''Search Images'''
+*Filter as follows for the 32 MSK Coffee Break Datasets:
+**Collection(s):'''RIDER'''
+**'''Available on NBIA'''
+**From (mm/dd/yyyy): '''07/17/2009''' to '''07/17/2009'''
+**Submit
+**Follow prompts to 32 MSK Coffee Break CT Image Sets
 ===RIDER CT Clinical===
@@ Line 60: / Line 55: @@
 * '''Contact Person''':
 * '''Public Availability''': at NCI
+==<Other Pathologies>==
+===<Dataset Nickname>===
+* '''Intended Purpose of Dataset''':
+* '''Modality''':
+* '''Slice Thickness''':
+* '''Acquisition Details''':
+* '''# of Patients''':
+* '''Patient Demographics/Selection Details''':
+* '''Typical # of timepoints''':
+* '''Outcome Data''':
+* '''Details of Reading/Markup performed''':
+* '''Contact Person''':
+* '''Public Availability''':